PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW23574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 375aa MW: 41940.5 Da PI: 4.5545 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.5e-19 | 111 | 160 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a +++++g RWW23574.1 111 QFRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 160 69*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MCGGAIISDF IPAARSRRVT DADLLWPYQK KDKSTKKKGS RRRLAQETED DFEADFREFN 60 DESGESEEDD DVEIVDVKLP AVPPKDGGIA LGPVEFDGPA ARSAKRKRKN QFRGIRQRPW 120 GKWAAEIRDP RKGVRVWLGT FNTAEEAARA YDAEARRIRG KKAKVNFPEE APTGLQKRLT 180 KLSAPKAPTS DRPQESLSFN QSFGYLNDID HDIYSTFDLF EEKVPIKQPM SQDSTEIKPA 240 PPSEGPGMMY SDQGGNSFGY SEFGWEHEVK TPEITTLDPT IAEVKNFTCL ENGGPLKKLK 300 NNAGETVPAE ETDGVKFSED FSTFESLMKF LQTPYLDGGS DDSIDSFLNY DMTQDESGVD 360 LWSFDDLPPV ASSVY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53910.1 | 6e-49 | ERF family protein |