PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23315.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 267aa MW: 29539.3 Da PI: 7.9472

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.3e-17	14	65	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg...kgRtlkqcksrwqkyl 48 +g+W+++Ed ll+ +v+q+G+g +W + ++++g ++R++k+c++rw++yl RWW23315.1 14 KGPWSPDEDALLKSYVEQHGTGgNWIALPQKIGtvgLKRCGKSCRLRWLNYL 65 79************************************************97 PP
2	Myb_DNA-binding	40.5	6.3e-13	72	114	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd l+ + G++ W+ Ia++++ gRt++++k++w++ RWW23315.1 72 GGFSEEEDNLICSLYISIGSR-WSIIAAHLP-GRTDNDIKNYWNT 114 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MGRAPCCDKA NVKKGPWSPD EDALLKSYVE QHGTGGNWIA LPQKIGTVGL KRCGKSCRLR 60 WLNYLRPDIK HGGFSEEEDN LICSLYISIG SRWSIIAAHL PGRTDNDIKN YWNTKLKKKL 120 FGKQRTDRGQ CRRVGRAKQE TDRFDDGGLG IIIDGVGQND YWTSTSIREL HGEVGGRSSS 180 DGVCHQSPLV APSPPLLPQP LREDCASLAS SSLPGVSTDL DELFRFDSVK LEGFDFFNGV 240 EGVKNWNEVS PLVCPSVVQA HNGVQQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	9e-78	MYB family protein