PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW23298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 338aa MW: 37121.8 Da PI: 4.8765 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 14 | 91 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...............................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...............................tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+ +v+ +G g W++Ia++++ +Rt++++k++w+++l RWW23298.1 14 KGPWTLEEDQKLLAYVENHGHGswralpakageppelsspplrkrrgvvsdafLWSAIASHLP-KRTDNEIKNYWNTHL 91 79*************************************************************.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MGRSPCCDKV NLKKGPWTLE EDQKLLAYVE NHGHGSWRAL PAKAGEPPEL SSPPLRKRRG 60 VVSDAFLWSA IASHLPKRTD NEIKNYWNTH LKKRLAKVGI DPCTLKATGN TADGRPGTAA 120 NLSHMAQWES ARLEAEARLA RESKLRAASS SMILQQQQMR SSSCLEVLRA RENTPGDTID 180 LESPTSTFSF PENRPPTTES GTWLVDDSDA AAAPASHQGS ENSEPEGAEW IFSGRDRSDC 240 RLTGFSVEAF NGEAPWLSEP YASQARGQFG AGFAGMLLGD LGEQKTWDHC RDSHTNGHET 300 FADGEEDEGE ESSNDWNGIL NWVNSPFSTS SPVFFDQD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 2e-46 | MYB family protein |