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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW22929.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 371aa MW: 42379.4 Da PI: 5.2521 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.5e-20 | 114 | 163 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a ++k++g RWW22929.1 114 KYRGIRQRP-WGKWAAEIRDPCK---GVRVWLGTFNTAEEAARAYDAEARKIRG 163 8********.**********854...3*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MCGGAFISNI IPAEPRWRRL TADYQWRDPK NEYGVKEGEK PKEKRWSSRR RRRASENTDD 60 DFEADFMHFE EDDEDGRFHF KPFAFASRDI PVPARPSVVD KPSAKSAKKN RKNKYRGIRQ 120 RPWGKWAAEI RDPCKGVRVW LGTFNTAEEA ARAYDAEARK IRGKKAKVNF PDAAFPRVQT 180 FLTKLTAPET PRMEMPRTDK CFNYLNDPFQ DFCSSFDFTE VEPIIQSEEL SPFPVIKPAP 240 RTVIAGMHLY SDQGSNLFGC PENDSLNEAK TLDISSVLAA TIFEVEASAY LENGGTQKQL 300 NNTVEQSVPN NENASGKAFK ELSDFELYMK FFQQPYSDGS TDDLINNLLS GDFTQDMNGM 360 DLWSFDGMPQ M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53910.3 | 3e-30 | ERF family protein |