PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22588.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 759aa MW: 84156.8 Da PI: 6.8919

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.4	1.4e-23	206	307	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + +++ l RWW22588.1 206 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAENGDL 300 89**************************996555555..8********************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RWW22588.1 301 CVGIRRA 307 **997 PP
2	Auxin_resp	116.5	2.3e-38	375	458	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk++ v++a+k+++ +GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ RWW22588.1 375 AAKLAANGKPFEVVYYPRASTPEFCVKAAAVKAAMKIQWYPGMRFKMAFETEDSSRISWfMGTISSVQVADPIRWPNSPWRLLQ 458 78999*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
VGIVLVGNDG VEVRHEEGFV GFELKFGDKD EKFHGFSIWC RSFLFFLHRL PQFRSERRNI 60 SDALKDLKNW LVWKVSSVML ELLLSDESTR EPSMKDTDEC LDSQLWHACA GGMVQMPAVN 120 SRVYYFPQGH AEHAQGFVDF GNSRWIPPFI LCRVTAVKFM AEPETDEVFA KIQMAPIRGS 180 ELEYAEDDGL VLGMNGIDVC GKPASFAKTL TQSDANNGGG FSVPRYCAET IFPRLDYSAD 240 PPVQTVIAKD VHGEVWKFRH IYRGTPRRHL LTTGWSTFVN QKKLVAGDSI VFLRAENGDL 300 CVGIRRAKKG GAGDGPDCWP GWNPPGSNGA SGYGGLSVFL REEDGKLMRG SGDDFDFSRG 360 MRGRSQMRID SVIEAAKLAA NGKPFEVVYY PRASTPEFCV KAAAVKAAMK IQWYPGMRFK 420 MAFETEDSSR ISWFMGTISS VQVADPIRWP NSPWRLLQVT WDEPELLQNV KCVSPWLVEL 480 VSNLPAIHLA HLSPPRKKPR ILQHPDFPFE GQCPMPMVVG NPIITRDSPL CCFSDNAPES 540 IQGTRHAQFG LSLSDVQLNK LQTRLFHTGF HRLDHATLPS RISTGVTVGN PTVCDKVSCL 600 LTISHPSQSL KKSCDGKPPQ LVLFGQPILT EEQVSLNKSE NTTSHCATRN SLSDENLEKI 660 VSMSDGSGSA INLKGSLEAF PSQKDHIASE FGHPTGQCKV FLESEDVGRT LDLSVLGSYE 720 ELYGRLADMF GTKKSELVSH VLYKNAAGAV KHTGDEPFR

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

VGIVLVGNDG VEVRHEEGFV GFELKFGDKD EKFHGFSIWC RSFLFFLHRL PQFRSERRNI  60
SDALKDLKNW LVWKVSSVML ELLLSDESTR EPSMKDTDEC LDSQLWHACA GGMVQMPAVN  120
SRVYYFPQGH AEHAQGFVDF GNSRWIPPFI LCRVTAVKFM AEPETDEVFA KIQMAPIRGS  180
ELEYAEDDGL VLGMNGIDVC GKPASFAKTL TQSDANNGGG FSVPRYCAET IFPRLDYSAD  240
PPVQTVIAKD VHGEVWKFRH IYRGTPRRHL LTTGWSTFVN QKKLVAGDSI VFLRAENGDL  300
CVGIRRAKKG GAGDGPDCWP GWNPPGSNGA SGYGGLSVFL REEDGKLMRG SGDDFDFSRG  360
MRGRSQMRID SVIEAAKLAA NGKPFEVVYY PRASTPEFCV KAAAVKAAMK IQWYPGMRFK  420
MAFETEDSSR ISWFMGTISS VQVADPIRWP NSPWRLLQVT WDEPELLQNV KCVSPWLVEL  480
VSNLPAIHLA HLSPPRKKPR ILQHPDFPFE GQCPMPMVVG NPIITRDSPL CCFSDNAPES  540
IQGTRHAQFG LSLSDVQLNK LQTRLFHTGF HRLDHATLPS RISTGVTVGN PTVCDKVSCL  600
LTISHPSQSL KKSCDGKPPQ LVLFGQPILT EEQVSLNKSE NTTSHCATRN SLSDENLEKI  660
VSMSDGSGSA INLKGSLEAF PSQKDHIASE FGHPTGQCKV FLESEDVGRT LDLSVLGSYE  720
ELYGRLADMF GTKKSELVSH VLYKNAAGAV KHTGDEPFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein