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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW21591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 293aa MW: 32680.4 Da PI: 4.5281 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 84.2 | 2.5e-26 | 1 | 71 | 59 | 127 |
NAM 59 yfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 +fF+++d+ky++++r+nrat+sgyWk tgkd+ ++s + +g+kktLvf+ grapkg++t+W+mhey RWW21591.1 1 FFFAPKDRKYPNSNRSNRATESGYWKRTGKDRMIKSGsdCPAMIGMKKTLVFHLGRAPKGVRTNWIMHEYL 71 8**********************************96444556***************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
FFFAPKDRKY PNSNRSNRAT ESGYWKRTGK DRMIKSGSDC PAMIGMKKTL VFHLGRAPKG 60 VRTNWIMHEY LTLESESDSG EQVSSFFVSF RIIYSFSLFM CGDMKPEEKT PISDNDDFTQ 120 RNVDEMESTG LFPPATPSPG ETLHGVVATE EVVTTLTQKN LGSDLQEILQ PLPLKTNVQP 180 SDVNGLAADN TDIMRSYPLK PEESHCNDTI VSDATNHGTV LGTELGPDDY RMSSTVLSYT 240 GYSFDALHHE CLQELSHFDN IGQDSVTEFL NAVLYDPEEC SLEVSNAPRG FCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.2 | 2e-30 | NAC family protein |