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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW21466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27861.1 Da PI: 6.8829 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 88 | 138 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr +k +g+WvAe r p + r +lg+f t+e+Aa a++aa +l+g RWW21466.1 88 PKYKGVRMRK-WGKWVAEARYP-----HsrERLWLGSFPTPEMAAMAYDAAVYCLRG 138 79******99.*******8886.....225*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MHVQIPQDLS HATPSISFGA PPRRQPRRLI RTTVDFFPLP AKSTPLLSYE YSSTPSNCYL 60 ANAQLREGRH RVFRVGMEKQ ESSKEVAPKY KGVRMRKWGK WVAEARYPHS RERLWLGSFP 120 TPEMAAMAYD AAVYCLRGPG EALNIPDHPP DIPSADRLSR YEIRHAAVQH AQEGAKRRAQ 180 QEEEGAKSVD PGEGSSGPGA SKEPAEETLP TLNSSTMVSG ARSWDDKGFC DDGGGDDDYD 240 GDAWFPLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-34 | ERF family protein |