PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW20717.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | FAR1 | ||||||||
Protein Properties | Length: 206aa MW: 23262.4 Da PI: 7.889 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.9 | 1.1e-25 | 83 | 171 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn+YA+++GF r+ +s++sk ++ ++++fvCskeg +++ +++ +++r+r + r gCka+++v ++ +++w+v+kle+ HnH+l RWW20717.1 83 SFYNDYARRLGFPFRVGRSRRSKGvEEVLIMKRFVCSKEGIYRKKPSSEGTRKRERISMREGCKAMMEVIRD-SDRWVVSKLEKAHNHHL 171 5*********************761556799*************999999*******************999.9**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MESTRSEGDE LIEDYVECLM SLDANARPCE NDNSSLATHA EDPTSIPVGI IVQPIRELAP 60 VGTEDNKEPT LGMEFESDEA AKSFYNDYAR RLGFPFRVGR SRRSKGVEEV LIMKRFVCSK 120 EGIYRKKPSS EGTRKRERIS MREGCKAMME VIRDSDRWVV SKLEKAHNHH LGTCSRVGYL 180 RARGFIDTSD KASIYPGVGP SKHLKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-23 | FAR1 family protein |