PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20505.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 409aa    MW: 45758.2 Da    PI: 7.5328
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.21.6e-12275322247
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 
                      +rWT+eE +++ da +++ g+   +W+++a+ ++ g+t  ++ s+++ +
       RWW20505.1 275 DRWTQEENKRFEDALAKFDGDipdRWEKVAALIP-GKTVPDVMSHYREL 322
                      69********************************.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MVGVGTARPV TPLIGTDLIL RTTGGELILL TTGGGGLNQY LATVVDDDRT LEIRGLTLRD  60
VLVHPIVTGD VNIHGRVAFL QGHAIALALH RVLAQGLQLG KHSFNSTAPL RRRLHGSPRA  120
VLRHHPHPLC DQQALTKRNK CVNIECIFVS MFNEHIHYSM LQVDRAPGEG LEGVPAVIGW  180
VLRQGSLCLD SSIGRCLCFF QASIFLLDLL LRTKVCFGSS NSILLGWFLC TRSSSTSDFC  240
DQREGFRERH MKTTRSWMDV LPCSTNWFVR QESGDRWTQE ENKRFEDALA KFDGDIPDRW  300
EKVAALIPGK TVPDVMSHYR ELVDDVTEIE AGRVPCPVYY GTSSFTLDWE NSYDPEGWKN  360
TYCGGGGKRS GARASHHERK KGIPWTEEEH RQVSSSFACI FWTLNSQPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.14e-39MYB family protein