PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW20031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | AP2 | ||||||||
Protein Properties | Length: 213aa MW: 24208.6 Da PI: 8.2089 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 22 | 4.1e-07 | 7 | 26 | 2 | 22 |
AP2 2 gykGVrwdkkrgrWvAeIrdp 22 +y+GVr+++ +g+Wv+eIr+p RWW20031.1 7 RYRGVRQRH-WGSWVSEIRHP 26 69******9.*********96 PP | |||||||
2 | AP2 | 29.5 | 1.9e-09 | 56 | 83 | 28 | 54 |
AP2 28 r.krfslgkfgtaeeAakaaiaarkkle 54 r +r++lg+f tae+Aa+a+++a++ + RWW20031.1 56 RkTRIWLGTFETAEDAARAYDEAARLMC 83 249*********************8775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVRPQQRYRG VRQRHWGSWV SEIRHPLLYT FISALYIASR LLVAVSFTSR IELYCRKTRI 60 WLGTFETAED AARAYDEAAR LMCGRRARTN FAFNPTCGPS SKSNYLSAAL TAKLHRYNLA 120 SLQASQPVAK ASPVQEPLPP FTADNKISID IGDQQKNKLA VAVQQQQVET GWIMKGNGHD 180 EVELSYLEEH HIEQMIEELL DSSLCMELCY TAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 6e-41 | ERF family protein |