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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW19794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 24961.1 Da PI: 8.0285 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.2 | 1.8e-17 | 66 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r +r +lg+f + eAa+a+++a+++l+g RWW19794.1 66 CNYRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFSSSLEAAQAYDKAARSLYG 116 56*****999.**********8...3.35***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MPFTAQRFRF AAPSSLYCCV ATFSLAAAKP RHGMGPEEKQ QKKCCPLRRS RKGCMKGKGG 60 PENQACNYRG VRQRTWGKWV AEIREPNRGA RLWLGTFSSS LEAAQAYDKA ARSLYGDCAR 120 LNLSDDSGPR RPSAKVEASC SPTCSTETST SESRASLPGS VQSPAGYFCG GSGLDDFDDY 180 VTGLPKAEDF GLEAFSHIPL FDDVGVFAET VFDKELLSFD PMQLSWCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40350.1 | 1e-39 | ERF family protein |