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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW19767.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 25334.3 Da PI: 4.6339 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 68 | 118 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g RWW19767.1 68 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFTTPEMAARAHDVAALSIKG 118 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MADPTNTSVP ESSVSSVSSL STASSSSSLT LSQTLQERTM GTCNQTATTM RNEGNGSAKR 60 LRDQSKHPVY RGVRMRNWGK WVSEIREPRK KSRIWLGTFT TPEMAARAHD VAALSIKGAA 120 AVLNFPELAG SLPRPATLSP RDVQAAAAKA AAMDPEAQAE PPAAAQGDSD ELEEIVELPR 180 LDDVCCFLDS AETRSEFLFD DPVDSWAHPL PWVESADLLW AASDAIFPTS FGTLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-56 | ERF family protein |