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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW19505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 255aa MW: 28272.3 Da PI: 6.843 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 9.9e-18 | 94 | 142 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr p++ ++r++lg+f tae+Aa+a++ a+++++g RWW19505.1 94 YRGVRMRA-WGKWVSEIRQPRK---KTRIWLGTFPTAEMAARAHDVAALSIKG 142 9****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MSLRLHHFCM GPSSCSFILL LWLGVHKSLH LHYILCDRST LVPSIMEESL YRDCEANTIS 60 KKTVKSGCKR VARTSCDGDD EARNRSKGRK HPAYRGVRMR AWGKWVSEIR QPRKKTRIWL 120 GTFPTAEMAA RAHDVAALSI KGQSACLNFP ELASELPRPA SAAPEDIQAA AALAASIMFG 180 DPRPGPCTSA ESGLRQTELP VSRSLPPLTP SSGSDDALFD LPDLLLDVGE GFCYSSPWEN 240 CLEFEREEPL LWEDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 5e-40 | ERF family protein |