PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW19429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 232aa MW: 26196.1 Da PI: 4.3601 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.9 | 4.1e-07 | 4 | 28 | 20 | 46 |
TTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46 G + W+ Ia+ ++ gRt++++k+ w++ RWW19429.1 4 GCR-WSQIASQLP-GRTDNEIKNLWNS 28 666.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MICGCRWSQI ASQLPGRTDN EIKNLWNSCL KKKLRQRGID PSSHKPLNEI KEEADETRMY 60 CSNTGATSEE LPIKPVFDTF PLIQIQTCLD SVAEDNVNIY NQIHQTLEPL GQKEGLCDYN 120 SALYVTERFG YGESSSNNSC YWNCSIGSEM NNVLGIEALN WASADKVEAP THVQTNGVES 180 HEQKWQEKQD MESSEDYSTY PLISLSHDLS GTCFNVPRCA LASEFNVDFF LE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 36 | LKKKLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 5e-23 | MYB family protein |