PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW19271.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 207aa MW: 23905.8 Da PI: 8.1251 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.7 | 1.3e-13 | 22 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT..................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..................tWktIartmgkgRtlkqcksrwqky 47 rg+ T++E+ + ++++++G++ +W++Iar ++ gRt++ +k++w+++ RWW19271.1 22 RGSITPQEENTIQELHALWGNRylfcsphrlrrltcaascRWSAIARSLP-GRTDNAIKNYWRTH 85 7889**********************************************.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
LRRSGKSCRL RWVNYLRPDL KRGSITPQEE NTIQELHALW GNRYLFCSPH RLRRLTCAAS 60 CRWSAIARSL PGRTDNAIKN YWRTHFKKGD TPTKKAERAR ARLLVRQQQE RQKQKQQQQE 120 AEDVGGTSMM MTMKHVEEEA MRAEELQEMT YLLQGGGFQG YMSDEDGSWG CLWNLDDDDD 180 DDASEYTEGG STSQVKDRVC HVGGNIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13480.1 | 7e-35 | MYB family protein |