PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18640.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GATA

Protein Properties

Length: 368aa MW: 38794.8 Da PI: 6.2342

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	57.1	2.4e-18	262	296	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C+t kTp+WR gp g+ktLCnaCG++y++ +l RWW18640.1 262 CLHCQTDKTPQWRTGPLGPKTLCNACGVRYKSGRL 296 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
METPEYFHGG FYRGGNPQCG PEKKAGGCGG GGGEDQFSLE DLLDFSNEEE DETGGTLPAG 60 GNSTDSSTVT AVDSYSNSFS GLDPHMSNDL ACRSLADASR SGDLCEPQYD ELAELEWLSN 120 FVEESFSSED LHKLHPISGV SSTTTGSSST TTAAAATRAE VSAHTQDAAG GRANHVAPFR 180 PEAVVPGKAR SKRSRAAPCS WSSRLLVVSP SLAAASSPES ELIVPASAAA ASAGGRKAVK 240 PASKKKDPTA GTAVAAGDGR KCLHCQTDKT PQWRTGPLGP KTLCNACGVR YKSGRLVPEY 300 RPAASPTFVV SKHSNSHRKV LELRRQKELQ QQQLFHAGTV ASFYDGPMPV AADDEDFLIH 360 GPDFRHLI

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

METPEYFHGG FYRGGNPQCG PEKKAGGCGG GGGEDQFSLE DLLDFSNEEE DETGGTLPAG  60
GNSTDSSTVT AVDSYSNSFS GLDPHMSNDL ACRSLADASR SGDLCEPQYD ELAELEWLSN  120
FVEESFSSED LHKLHPISGV SSTTTGSSST TTAAAATRAE VSAHTQDAAG GRANHVAPFR  180
PEAVVPGKAR SKRSRAAPCS WSSRLLVVSP SLAAASSPES ELIVPASAAA ASAGGRKAVK  240
PASKKKDPTA GTAVAAGDGR KCLHCQTDKT PQWRTGPLGP KTLCNACGVR YKSGRLVPEY  300
RPAASPTFVV SKHSNSHRKV LELRRQKELQ QQQLFHAGTV ASFYDGPMPV AADDEDFLIH  360
GPDFRHLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25830.1	8e-58	GATA family protein