PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18607.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SRS

Protein Properties

Length: 342aa MW: 36473.5 Da PI: 7.7436

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	197	5.9e-61	88	273	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...............aeaaskrkrel.......k 79 sg +sCqdCGnqakkdC+h RCRtCCksrgf+C thvkstWvpaa+rrerqqqlaa+ +++ +++ ++skr+re + RWW18607.1 88 SGVVSCQDCGNQAKKDCTHLRCRTCCKSRGFQCPTHVKSTWVPAARRRERQQQLAALVQHEHSHRgegraagevsggsagGGDTSKRPREItafagvpT 186 67899**************************************************999999889999**999887889999999866544432 PP DUF702 80 skkqsalsstklssaeskkeletss.................lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + +++++ t+ s a ++ ++ +avfrcvrvs vd++++e+aYqtavsigGhvf+GiLyd+G+++ RWW18607.1 187 AMATTTTYGTTFSYALPNA-----VvvisstirrilcvihsfCCTHQTPHAVFRCVRVSPVDEADDEYAYQTAVSIGGHVFRGILYDHGADA 273 3333333333333333343.....2444459999*99666778889*************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MAEFLLGSGG GSQQHRGDQQ GVIPPSESFF LYGGRGSRSE DIAYTRGFEL WQQHQIQRED 60 QLYSSSGLPD DLPSLAGRPM RGGPGGGSGV VSCQDCGNQA KKDCTHLRCR TCCKSRGFQC 120 PTHVKSTWVP AARRRERQQQ LAALVQHEHS HRGEGRAAGE VSGGSAGGGD TSKRPREITA 180 FAGVPTAMAT TTTYGTTFSY ALPNAVVVIS STIRRILCVI HSFCCTHQTP HAVFRCVRVS 240 PVDEADDEYA YQTAVSIGGH VFRGILYDHG ADAEYPSSSS SRYQLNHGEG SSSPAAVAAA 300 AITAGNPVIT ATAAATELLD PYATPLSAFM AGTQFFPHQH RP

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MAEFLLGSGG GSQQHRGDQQ GVIPPSESFF LYGGRGSRSE DIAYTRGFEL WQQHQIQRED  60
QLYSSSGLPD DLPSLAGRPM RGGPGGGSGV VSCQDCGNQA KKDCTHLRCR TCCKSRGFQC  120
PTHVKSTWVP AARRRERQQQ LAALVQHEHS HRGEGRAAGE VSGGSAGGGD TSKRPREITA  180
FAGVPTAMAT TTTYGTTFSY ALPNAVVVIS STIRRILCVI HSFCCTHQTP HAVFRCVRVS  240
PVDEADDEYA YQTAVSIGGH VFRGILYDHG ADAEYPSSSS SRYQLNHGEG SSSPAAVAAA  300
AITAGNPVIT ATAAATELLD PYATPLSAFM AGTQFFPHQH RP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	5e-38	SRS family protein