PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18316.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 290aa MW: 30983.3 Da PI: 5.8814

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18316.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	46.3	1.2e-14	150	182	1	33
--SSTT-----TT--HHHHHTT--HHHHT-S-E CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvv 33 +CqvegC+adls+ ++yhrrhkvCe+h+ka++ RWW18316.1 150 TCQVEGCDADLSDSRDYHRRHKVCEMHAKASNL 182 6****************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MEARIGSKSH QFLAAGTSNV NVIGQKGVEW DLNDWRWDGE HFVATPLDAV PADCWSKHLR 60 QDAAKGLVLN SPSSSSEGAD CGLVEKDNGD SEKKRRIVVV EEDESCGVAG SLSLRLGGHA 120 YPVVESDLAN WEGKNEKKNK SQGGSSSHPT CQVEGCDADL SDSRDYHRRH KVCEMHAKAS 180 NLATLANSLD PSDLSRLLRA AQDLPKLVTT AGTSSEAIIT SVPNGVLEQD SRSPLGSAAK 240 MTCTPGVQGP PQETDHIPSV ADVPKIGRES SDGEASHAVP HLHILHSKYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	1e-23	SBP family protein