PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW18071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 142aa MW: 16507.5 Da PI: 9.0627 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.4 | 1.8e-09 | 15 | 59 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT+eE +++ a + + + +W +art+g ++ ++++ ++ RWW18071.1 15 SWTEEENKRFEMALAHFDDDtpdRWVHVARTVG-SKSVEEVRRHYE 59 7*****************99*************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MASGSKSSSR KLQDSWTEEE NKRFEMALAH FDDDTPDRWV HVARTVGSKS VEEVRRHYEH 60 LVKDIELIDS TKEPFYNYPS SNGRRRSNGT SDQEKRWLLL RYSMLSSFLF FISGIPPPFR 120 RPSLVFAFLK NETCGVAFHS IS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 1e-22 | MYB_related family protein |