PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW17808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 175aa MW: 18895.4 Da PI: 9.3295 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 9.6e-21 | 90 | 140 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GVr+++ +g+W+AeIrdp+ r r +lg+f+tae Aaka+++a+ +++g RWW17808.1 90 SKYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEAAAKAYDRAAIEFRG 140 89********.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MPSFTDPQRS FPSFSGPSLE QETSAIVSAL VIVLSGHATA LPLPDTCRLC GIAGCLGCDF 60 FFASADDDVS AAPAVASTDP GRRRNATKKS KYRGVRQRPW GKWAAEIRDP RRAVRKWLGT 120 FDTAEAAAKA YDRAAIEFRG PRAKLNFPFP GQTPPAAEQQ QQVMETVGSG TGYMI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 3e-27 | ERF family protein |