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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW17476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 372aa MW: 41442.6 Da PI: 4.7086 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 122 | 171 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++a +++++g RWW17476.1 122 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 171 69*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MCGGAIISDF IPATRSARRL TAGYLWPNLK TGGANEATKK SGHRRAVEEI EDDFEADFLE 60 FEYQALESEG EDEVEIVEKP FPFACKGEKN WVLTASWYFI ARSIALKPVK FNGSAKKKRK 120 NQYRGIRQRP WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDAEARRIR GTKAKVNFPD 180 EASPSVQKCS LKSNAPKTPK PNPQEMLKVN PYGYMNDPDV DFCSVFDCID DKEPVKQSMN 240 MDSSGMKLSP PVDGPAIDLY SDQGSNPFDC SEYGWESEIK TPSITSFLGP AMNEAEGTPY 300 LEQGAPLKKL KNNSGEVVAK LSEELSAFES YMKFLQVPYL EEGSDGSIES LLVSDVDLWS 360 FDDLPPVAVG SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14230.1 | 5e-51 | ERF family protein |