PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW17158.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 24028.5 Da PI: 10.2604 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.5 | 1.9e-19 | 70 | 120 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp + + r++lg+f+tae+Aa+a+++a+ +++g RWW17158.1 70 RFRGVRRRP-WGKFAAEIRDP---NrRGLRVWLGTFDTAEDAARAYDRAAFRMRG 120 69*******.**********9...4334*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MASSIGRGTD PTLDLIRDHL LADLPPTPPS SVLPPPLPVA RPSLTVALPL SRPFDWADES 60 PMANPGDGRR FRGVRRRPWG KFAAEIRDPN RRGLRVWLGT FDTAEDAARA YDRAAFRMRG 120 RKAILNFPNE VGCSGRWAAA PPAPPAAGKR KREAAVLARR IKKESSPESE VVDPGCVPLS 180 PSSWSSVWDC EHADTEGLFN VPPLSPVSPH PPLGFAQLLV I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 2e-12 | ERF family protein |