PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16826.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 452aa MW: 51920 Da PI: 8.7918

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16826.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	33.5	5.6e-11	1	24	12	35
GATA 12 WRrgpdgnktLCnaCGlyyrkkgl 35 +Rrgp+g++tLCnaCG+ + k ++ RWW16826.1 1 MRRGPEGPRTLCNACGIAWTKGKM 24 5*******************9875 PP
2	FAR1	90.2	2.7e-28	58	143	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA +vGFsvrks+s ks++n + +rtfvCs++g+r+++k + ++ +r+r+etr+gC a++++k + +gk++vt++ +HnH+ RWW16826.1 58 EFYNKYAGHVGFSVRKSSSDKSSENV-TRSRTFVCSRQGFRKDKKGA-KEVKRPRPETRIGCPARMTIKITPSGKYRVTEFIADHNHQ 143 6******************96555.99**********9999.999**********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MRRGPEGPRT LCNACGIAWT KGKMRRMVDP NGPLNEVTMA KLVPEIDMEF ESEEKAYEFY 60 NKYAGHVGFS VRKSSSDKSS ENVTRSRTFV CSRQGFRKDK KGAKEVKRPR PETRIGCPAR 120 MTIKITPSGK YRVTEFIADH NHQPAPPSTT HMLRSQRITI ELQAAEADLS DDSGTTPKST 180 TMLDKYDLKN NEWLGKLFED RDKWALPYGR DIYCADMKST LQNESLSSVL KKYLSPQLDL 240 LSSFKQYERV LDEHRYAELQ ADFHASQSFP RIPPSKLLKQ AANMYTPVVF EIFRKEFEMF 300 MDSMLFGCGE VETIYEYRVA VTDKPKEHYV RFDSRDCSAY CSCKKFEFVG IQCCHVLKVL 360 DFRNIKELPL KYFLKRWKKD AKSSNEGNNW VITSEGDPKT PTSSSLIVPV TSYAQQQGFH 420 GTSQFSQDPS VSDLHQHSFH ANTQLNQVIT WV

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MRRGPEGPRT LCNACGIAWT KGKMRRMVDP NGPLNEVTMA KLVPEIDMEF ESEEKAYEFY  60
NKYAGHVGFS VRKSSSDKSS ENVTRSRTFV CSRQGFRKDK KGAKEVKRPR PETRIGCPAR  120
MTIKITPSGK YRVTEFIADH NHQPAPPSTT HMLRSQRITI ELQAAEADLS DDSGTTPKST  180
TMLDKYDLKN NEWLGKLFED RDKWALPYGR DIYCADMKST LQNESLSSVL KKYLSPQLDL  240
LSSFKQYERV LDEHRYAELQ ADFHASQSFP RIPPSKLLKQ AANMYTPVVF EIFRKEFEMF  300
MDSMLFGCGE VETIYEYRVA VTDKPKEHYV RFDSRDCSAY CSCKKFEFVG IQCCHVLKVL  360
DFRNIKELPL KYFLKRWKKD AKSSNEGNNW VITSEGDPKT PTSSSLIVPV TSYAQQQGFH  420
GTSQFSQDPS VSDLHQHSFH ANTQLNQVIT WV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	111	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-35	FAR1 family protein