PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16507.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Dof

Protein Properties

Length: 345aa MW: 37037.6 Da PI: 8.8014

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.2	3.8e-38	50	108	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++al+cprCds+ntkfCy+nnyslsqPr+fCkaC+ryWt+GGalrnvPvGg +rknk++ RWW16507.1 50 QAALRCPRCDSSNTKFCYFNNYSLSQPRHFCKACKRYWTHGGALRNVPVGGRCRKNKRA 108 67899****************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MDDRLLATAN NNSSSNGTNT NKNNTIHAGS ATLDVSGVMN KLLSASEHAQ AALRCPRCDS 60 SNTKFCYFNN YSLSQPRHFC KACKRYWTHG GALRNVPVGG RCRKNKRAKM PVAASTAPQK 120 RPQPHLLAPP DPIRPISVQI SSSSYLGVAA SLCALQTASA SSSSDMSPAL PIVASSIQIP 180 SFASTAFDLQ SHLGSLGLDL SSKPQRDSEY HLGELQSLPS LSSTAMLLLN DHPLFGSSLQ 240 SPPLVARSTK HPKRTQDLCS FNELQASGRN WSIDRMMKEV KLEGQTNDMI NSNNSSCIDW 300 QIPIPTEISL DNSGSAAAMY WNSAFGSGSG WPDNTNLGSS LTPLI

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MDDRLLATAN NNSSSNGTNT NKNNTIHAGS ATLDVSGVMN KLLSASEHAQ AALRCPRCDS  60
SNTKFCYFNN YSLSQPRHFC KACKRYWTHG GALRNVPVGG RCRKNKRAKM PVAASTAPQK  120
RPQPHLLAPP DPIRPISVQI SSSSYLGVAA SLCALQTASA SSSSDMSPAL PIVASSIQIP  180
SFASTAFDLQ SHLGSLGLDL SSKPQRDSEY HLGELQSLPS LSSTAMLLLN DHPLFGSSLQ  240
SPPLVARSTK HPKRTQDLCS FNELQASGRN WSIDRMMKEV KLEGQTNDMI NSNNSSCIDW  300
QIPIPTEISL DNSGSAAAMY WNSAFGSGSG WPDNTNLGSS LTPLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-33	Dof family protein