PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16269.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GeBP

Protein Properties

Length: 444aa MW: 48012 Da PI: 4.574

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105.1	5.3e-33	168	267	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96 lfqrlw++e ei +LqG+ +f++++g+ +++ d+ fye +kk+++f+++k+ql+eK+rrLKkK++++v++ ++ gk+++f+++h++ i+++++ iW RWW16269.1 168 LFQRLWTDEEEIKILQGFFEFTSRRGTtfASHQyDTGPFYEEIKKQLQFEFTKNQLIEKLRRLKKKYRNCVSRmRSMGKDFAFKSAHERAIYDIARNIW 266 79**********************99877778***********************************7889******************** PP DUF573 97 g 97 RWW16269.1 267 S 267 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MPSAEEAEQE RAVFEDEEDT DDDDESDDSE DEDDDGGDGQ ASQATLPPPP PLQPQASPAS 60 GRPNFAASSS HYTADPNSDP NANFSPNPNL TSSAAVASAT TSTATAAPQN GAISVQALSV 120 SAAASAPSSD AALFTPSSTS VPVLVSAASA SEDRRSLAVV SFDDSRRLFQ RLWTDEEEIK 180 ILQGFFEFTS RRGTTFASHQ YDTGPFYEEI KKQLQFEFTK NQLIEKLRRL KKKYRNCVSR 240 MRSMGKDFAF KSAHERAIYD IARNIWSASV KRTHESDDED LNTTIPNEVI TVPINEGSLS 300 SNRRISRSRR RLNRRLSEEA AAAAPVGGVV PENSTPLMQT PLASASGMPS IIEETVKSCL 360 SPLFKELINS AIGGPLGPGP SGGTSPFSLL PLSLGDSSLG APGTPVDDKW RKQQILEMEV 420 YLKRIDLVRD HIKATLEELK SSGN

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MPSAEEAEQE RAVFEDEEDT DDDDESDDSE DEDDDGGDGQ ASQATLPPPP PLQPQASPAS  60
GRPNFAASSS HYTADPNSDP NANFSPNPNL TSSAAVASAT TSTATAAPQN GAISVQALSV  120
SAAASAPSSD AALFTPSSTS VPVLVSAASA SEDRRSLAVV SFDDSRRLFQ RLWTDEEEIK  180
ILQGFFEFTS RRGTTFASHQ YDTGPFYEEI KKQLQFEFTK NQLIEKLRRL KKKYRNCVSR  240
MRSMGKDFAF KSAHERAIYD IARNIWSASV KRTHESDDED LNTTIPNEVI TVPINEGSLS  300
SNRRISRSRR RLNRRLSEEA AAAAPVGGVV PENSTPLMQT PLASASGMPS IIEETVKSCL  360
SPLFKELINS AIGGPLGPGP SGGTSPFSLL PLSLGDSSLG APGTPVDDKW RKQQILEMEV  420
YLKRIDLVRD HIKATLEELK SSGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	309	316	RRRLNRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	5e-38	GeBP family protein