PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16017.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 476aa MW: 55129 Da PI: 9.3166

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.3	1.7e-25	36	125	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Y +YA++vGF vr++ks++s++++++++r+fvC++eg+++++ + k++r+r +tr gC a+++v ++++gkw+vtkl +eH+H + RWW16017.1 36 EYYISYANRVGFGVRMNKSRRSRKDDTVIMRRFVCTREGFHSKRVIYdDGKKKRKRGTTREGCMAMIEVIRKDHGKWVVTKLITEHTHMV 125 59**************************************9987647889999*******************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MALALGALGI ELNLDGPDIG EPCIGMEFDS DDAAKEYYIS YANRVGFGVR MNKSRRSRKD 60 DTVIMRRFVC TREGFHSKRV IYDDGKKKRK RGTTREGCMA MIEVIRKDHG KWVVTKLITE 120 HTHMVAFPGK VQPRRDLKEC INHSETVEEF DTRWELILDK YNLWDNPWLQ SLYDVRQRWA 180 PAYQKSTFFP ELSASQRSES LNKFFKRNFN SKTSLLVFIA RFDQEMASQN EKEAQADFAA 240 AYAKPLLRTP SPIEKQAAEV YTKEIFDKFQ EEFIESLGYY VDKIEDGPNN KYNVTKEEDS 300 GRAYVVIFSE PDKKARCSCY KFESSGILCR HILRVFFIVG IRVLPEYYIL KRWTRDAASS 360 VILDERATEP GLNFQDCLVA WYNDLCLDAV KYGIEGAMSS EIYKVAKAAL QKALAEVVAA 420 KNTQRKGQQN LQRFARLQKM QYKMPLPKLQ TKKTPARSTQ DEVDRSKRSV KDDSRY

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MALALGALGI ELNLDGPDIG EPCIGMEFDS DDAAKEYYIS YANRVGFGVR MNKSRRSRKD  60
DTVIMRRFVC TREGFHSKRV IYDDGKKKRK RGTTREGCMA MIEVIRKDHG KWVVTKLITE  120
HTHMVAFPGK VQPRRDLKEC INHSETVEEF DTRWELILDK YNLWDNPWLQ SLYDVRQRWA  180
PAYQKSTFFP ELSASQRSES LNKFFKRNFN SKTSLLVFIA RFDQEMASQN EKEAQADFAA  240
AYAKPLLRTP SPIEKQAAEV YTKEIFDKFQ EEFIESLGYY VDKIEDGPNN KYNVTKEEDS  300
GRAYVVIFSE PDKKARCSCY KFESSGILCR HILRVFFIVG IRVLPEYYIL KRWTRDAASS  360
VILDERATEP GLNFQDCLVA WYNDLCLDAV KYGIEGAMSS EIYKVAKAAL QKALAEVVAA  420
KNTQRKGQQN LQRFARLQKM QYKMPLPKLQ TKKTPARSTQ DEVDRSKRSV KDDSRY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	90	RRSRKDDTVIMRRFVCTREGFHSKRVIYDDGKKKRK
2	86	111	KKKRKRGTTREGCMAMIEVIRKDHGK
3	87	112	KKKRKRGTTREGCMAMIEVIRKDHGK
4	88	113	KKKRKRGTTREGCMAMIEVIRKDHGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	5e-72	FAR1 family protein