PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WOX | ||||||||
Protein Properties | Length: 180aa MW: 19688.8 Da PI: 8.9176 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.4 | 1.5e-15 | 28 | 88 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p + e ++ k l ++ +++V++WFqNrR + ++ RWW15118.1 28 RTRWTPKPEQILILESIFNSgMVNPPKGETVRIRKLLeqfgSVGDANVFYWFQNRRSRSRR 88 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 106.7 | 1.4e-34 | 27 | 90 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +rtRWtP+peQi iLe++++sG+++P+k e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q RWW15118.1 27 VRTRWTPKPEQILILESIFNSGMVNPPKGETVRIRKLLEQFGSVGDANVFYWFQNRRSRSRRRQ 90 689***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MDDHDQCHNN SPNLRRSVPD GTVTEPVRTR WTPKPEQILI LESIFNSGMV NPPKGETVRI 60 RKLLEQFGSV GDANVFYWFQ NRRSRSRRRQ RQLQASLVAG QQVSSGVPRA SAPPTSSSTS 120 SNNSSGGGGS AGLFSCSSFA SSSSSNFMIG DSADDLFSIC RQMGFMESTQ DIPQLHYQPG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17810.1 | 7e-35 | WOX family protein |