PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14934.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 604aa MW: 66324.6 Da PI: 9.155

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	54.1	4.6e-17	487	551	36	100
DUF260 36 lFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 F++s ++l+++++ + da+sslvyeA+ar+rdPvyG+vg i++lq+q++ql+ +la++++e RWW14934.1 487 SFSTSIRQRLVARWSMMVQADAVSSLVYEANARMRDPVYGCVGAISHLQHQVSQLQMQLAVAQAE 551 588888889999999*********************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MAICGPMSRP MQWKVVMGYR GRRVEKYVET FCAGVFSVSA VSLRSALMRA TARQRETQKR 60 RRMRSNRCSI LFLRLLLLLL LVAWSPPSRW RGRGWGATAV SVNWGTSSSS SHPLPPAVVV 120 PGLLQANRVA RVKLPDADPS VLAALAGSGI AVAIGVPNEM LRSLSSSKSA AVSWVHDNVT 180 RYVSSTGGGS VRIDSDVYQS ESNLPSKGHF RPDLNKTMIE LLSFLDKHGS PFVVDINPFL 240 TFQQKKNLSL DFVLFQTNSH PLSDGPNKYR NHFDMSIDTL VSALSKVGYA EMDIIVGKIG 300 WPTDGAMNAT PAVAQIFMQG LVDRLQSKAG TPLRPKRPPR ETYIFSLLDE DQRSIKTGNY 360 ERHWGIFTFD GQAKYNVDLG QGSKALASAH DVDYLAQKWC VVNNNKDISN VSSSASEACS 420 AADCSALSPG GSCSGIGWPG NVSYAFNSYF QLRDQSADSC DFGGLGLITT VDPSVDDCRY 480 SIALRTSFST SIRQRLVARW SMMVQADAVS SLVYEANARM RDPVYGCVGA ISHLQHQVSQ 540 LQMQLAVAQA EILCIQMQQT QLMDVDGKQY LMQSDLSAMV HLTNYPSSSS NVPHEPLKRE 600 NPWT

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MAICGPMSRP MQWKVVMGYR GRRVEKYVET FCAGVFSVSA VSLRSALMRA TARQRETQKR  60
RRMRSNRCSI LFLRLLLLLL LVAWSPPSRW RGRGWGATAV SVNWGTSSSS SHPLPPAVVV  120
PGLLQANRVA RVKLPDADPS VLAALAGSGI AVAIGVPNEM LRSLSSSKSA AVSWVHDNVT  180
RYVSSTGGGS VRIDSDVYQS ESNLPSKGHF RPDLNKTMIE LLSFLDKHGS PFVVDINPFL  240
TFQQKKNLSL DFVLFQTNSH PLSDGPNKYR NHFDMSIDTL VSALSKVGYA EMDIIVGKIG  300
WPTDGAMNAT PAVAQIFMQG LVDRLQSKAG TPLRPKRPPR ETYIFSLLDE DQRSIKTGNY  360
ERHWGIFTFD GQAKYNVDLG QGSKALASAH DVDYLAQKWC VVNNNKDISN VSSSASEACS  420
AADCSALSPG GSCSGIGWPG NVSYAFNSYF QLRDQSADSC DFGGLGLITT VDPSVDDCRY  480
SIALRTSFST SIRQRLVARW SMMVQADAVS SLVYEANARM RDPVYGCVGA ISHLQHQVSQ  540
LQMQLAVAQA EILCIQMQQT QLMDVDGKQY LMQSDLSAMV HLTNYPSSSS NVPHEPLKRE  600
NPWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	7e-27	LBD family protein