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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW14910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 291aa MW: 32650.9 Da PI: 8.9676 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.9 | 7.7e-16 | 221 | 263 | 5 | 51 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 GVrw++ +grW+ eI+dp++ +kr++lg+f+t eeAa ++ a+ RWW14910.1 221 GVRWRP-WGRWATEIHDPCQ---QKRVWLGRFDTTEEAATVYDMAAM 263 9*****.**********943...4*******************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
KNDPALEAYR SRVLYTNHER EPDNDPRGPI KEEVGDGGSN GGDEVFIAVD FSEVYQDRVF 60 SERKGTEEAV RFDAEPEGIG CMACGNIRQD SVFGSAVMGH LYLHRRVGHT WATLSLPYLT 120 SRQAPIVRGI VRLSTTISAL TRRLSPAIRG QGVLGQGALV EGWSGTLALL HRSLSGETVS 180 WPQDRREELK FSEHVVKTRK TIPTKRATSR GSSCWKRVVC GVRWRPWGRW ATEIHDPCQQ 240 KRVWLGRFDT TEEAATVYDM AAMWLKGSKV VLNFPVARPT VRTTEEEEAK V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03800.1 | 4e-21 | ERF family protein |