PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14801.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 549aa MW: 59645 Da PI: 8.694

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.3	9e-41	181	320	2	130
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec.eaesssssasnsssgka 90 g+kdrhsk++T++g+RdRRvRls+++a++f+dLqd+LG+d++sk+ieWL+++a +ai el+ + s + a+++ ++++s s++++++++ RWW14801.1 181 SGGKDRHSKVYTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAAAINELPPLdgfpklpqpSGDEAMKAdPDVERSYSQQQQQQQHP 279 689***********************************************************99999966533334444677788888888888888 PP TCP 91 aksaakskksqksaasalnlak.esrakarararertrekm 130 ++++ +s+ s++s+ s+l+l++ esr ar+rarer +++ RWW14801.1 280 STKSGCSSTSDTSKGSVLSLSRsESRIMARERARERAVKDK 320 88888****************************765554 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MSWLSEACQN SVSDAAIVAV SASAAVVAAA ALQAAKSLQS SSLKPRAEIS GRERDLKRPK 60 VSPFSTQFRC LLSLPLYCDY ELIINAEGQP SADNGVVEKA IKIRSWARDR HESEMELENT 120 HACKRSRTVG NGGQASKIGR KEHQDEDEED RERKGGGSDA GRVAPWLNHP SSRIFRVSRA 180 SGGKDRHSKV YTAKGLRDRR VRLSVSTAIQ FYDLQDRLGY DQPSKAIEWL IKAAAAAINE 240 LPPLDGFPKL PQPSGDEAMK ADPDVERSYS QQQQQQQHPS TKSGCSSTSD TSKGSVLSLS 300 RSESRIMARE RARERAVKDK EKGRDDSSHI AAFLHQNLNP QTSLSFTKLL ASSNGANNVA 360 AVAAIEENSG HNCIQKQIPT AIYFGQAGLF PQSQKSQQLP SGFSSQSYFG NSCPMGMSPY 420 NVAATGDHQE MQQFSSLQDN FFPVSAVVAT GDYNLHFSTS SGLAGFNRGT LQSNSPAQLP 480 QEHHHSHNHL QRLSSTVDGS NLQFFGAAAG SAAAATNAEN QFPSGFGDHL QLCYRDGYRQ 540 SDLKGKAKN

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MSWLSEACQN SVSDAAIVAV SASAAVVAAA ALQAAKSLQS SSLKPRAEIS GRERDLKRPK  60
VSPFSTQFRC LLSLPLYCDY ELIINAEGQP SADNGVVEKA IKIRSWARDR HESEMELENT  120
HACKRSRTVG NGGQASKIGR KEHQDEDEED RERKGGGSDA GRVAPWLNHP SSRIFRVSRA  180
SGGKDRHSKV YTAKGLRDRR VRLSVSTAIQ FYDLQDRLGY DQPSKAIEWL IKAAAAAINE  240
LPPLDGFPKL PQPSGDEAMK ADPDVERSYS QQQQQQQHPS TKSGCSSTSD TSKGSVLSLS  300
RSESRIMARE RARERAVKDK EKGRDDSSHI AAFLHQNLNP QTSLSFTKLL ASSNGANNVA  360
AVAAIEENSG HNCIQKQIPT AIYFGQAGLF PQSQKSQQLP SGFSSQSYFG NSCPMGMSPY  420
NVAATGDHQE MQQFSSLQDN FFPVSAVVAT GDYNLHFSTS SGLAGFNRGT LQSNSPAQLP  480
QEHHHSHNHL QRLSSTVDGS NLQFFGAAAG SAAAATNAEN QFPSGFGDHL QLCYRDGYRQ  540
SDLKGKAKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	8e-40	TCP family protein