PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW14386.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 371aa MW: 39971.9 Da PI: 10.0337 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.9 | 4.5e-17 | 190 | 241 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ grWv+e+r+p +k+ r+++g+f ta++Aa+a++ a+ l+g RWW14386.1 190 PVYRGVRQRGAAGRWVCEVREP---NKKSRIWVGTFPTADMAARAHDVAAMMLRG 241 68****************9998...347***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MLLALTQSKR EMVWKGQRSF VSGERSGHVK SGCVRDSQPS VTDRTTRKRC GDASAEGTDT 60 CVAKIDHAIT ILSSRRKRER VKEKVSAPLD PAVVGVPALR GRRRRLPSCV YLFPHGSAPS 120 SPATKTHLFS RSTAHSRTKR HSPSMETFSG GEDGAASASG SRETWSYPTV SQAPPKRPAG 180 RTKFRETRHP VYRGVRQRGA AGRWVCEVRE PNKKSRIWVG TFPTADMAAR AHDVAAMMLR 240 GRSACLNFAD SAWRLHVPPS FSGPRDIARA AAEAAEAFRP PSDSNGDAKE VKTSATVTTA 300 VAATPSTMSP EEDTGGGGAF DAMAYDDMDL GFGYYSGLAE GLLLVDPPPN GGCNWDDMDA 360 GADVPLWSHS I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 9e-47 | ERF family protein |