PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW13988.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 621aa MW: 71353.3 Da PI: 8.8311

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW13988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.7	7e-27	96	184	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA +vGFsvr+++s++sk n++i++ +fvCs+eg+++e++ +k+r++ a+ r gCka+l+v ++ d++w+vtkl++eHnHe+ RWW13988.1 96 FYIAYAGRVGFSVRIARSRRSKCNESIIMLRFVCSREGFSREKRIIaGKKTRKRAASIREGCKAMLEVIRRGDARWVVTKLVKEHNHEV 184 9************************************998876546788888999****************************96 PP
2	FAR1	67.2	4.2e-21	218	309	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA++vGF+ r+++s++s ++++ ++ ++vCsk+ +++ +++ ++k+ +++ ++ gC+a +++ +++ + w v+kl+leHnHel p RWW13988.1 218 FYYAYASRVGFEARVRQSRRSLHDESLKMLKLVCSKHRYHSGRDNGsdENKRVQNQDPSKEGCDALFEIIRKDADIWIVSKLVLEHNHELKP 309 9***********************************99988887556777789999*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MMDGNSHGVN GLIEQHVDLE DDSINFWTTL GVSPHVHVVE PEHHLVPQHQ HHHIEQQPLE 60 LVEQSVRREL FAVEGDPRIE PFVGMEFESG EAAKTFYIAY AGRVGFSVRI ARSRRSKCNE 120 SIIMLRFVCS REGFSREKRI IAGKKTRKRA ASIREGCKAM LEVIRRGDAR WVVTKLVKEH 180 NHEVGMPSRV HYIATEGDAV MDPYIGMEFE SLEVAKTFYY AYASRVGFEA RVRQSRRSLH 240 DESLKMLKLV CSKHRYHSGR DNGSDENKRV QNQDPSKEGC DALFEIIRKD ADIWIVSKLV 300 LEHNHELKPS PPSKNVYMQS LYNIRQQWVP VFVKQTFLAE VPGSQRCGNF DKVIEKYFTT 360 KTLLRVAVRQ LSQMLASQYE KEAQAEFVTL FEKPFLRTAS PMEKQAAGIY TRSIFDRFQE 420 EFVESLGYHV DKIEDGHISK YRVMRNEEDD EVYSVYFNVT ENKAHCGCCM FECSGILCRH 480 ALRVFIVNGV RTLPNDYILK RWTKHAKSGS VLDDYGIELR GYSDDPSIAR YNDLCRDAIR 540 CAREGATSTE FYTVAKDSLQ KAVNEIVSTK QKRGQQTLQS FIASQKKQTK KVAKITPSKD 600 ASSKNLRKLT SIKLLSENDI R

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MMDGNSHGVN GLIEQHVDLE DDSINFWTTL GVSPHVHVVE PEHHLVPQHQ HHHIEQQPLE  60
LVEQSVRREL FAVEGDPRIE PFVGMEFESG EAAKTFYIAY AGRVGFSVRI ARSRRSKCNE  120
SIIMLRFVCS REGFSREKRI IAGKKTRKRA ASIREGCKAM LEVIRRGDAR WVVTKLVKEH  180
NHEVGMPSRV HYIATEGDAV MDPYIGMEFE SLEVAKTFYY AYASRVGFEA RVRQSRRSLH  240
DESLKMLKLV CSKHRYHSGR DNGSDENKRV QNQDPSKEGC DALFEIIRKD ADIWIVSKLV  300
LEHNHELKPS PPSKNVYMQS LYNIRQQWVP VFVKQTFLAE VPGSQRCGNF DKVIEKYFTT  360
KTLLRVAVRQ LSQMLASQYE KEAQAEFVTL FEKPFLRTAS PMEKQAAGIY TRSIFDRFQE  420
EFVESLGYHV DKIEDGHISK YRVMRNEEDD EVYSVYFNVT ENKAHCGCCM FECSGILCRH  480
ALRVFIVNGV RTLPNDYILK RWTKHAKSGS VLDDYGIELR GYSDDPSIAR YNDLCRDAIR  540
CAREGATSTE FYTVAKDSLQ KAVNEIVSTK QKRGQQTLQS FIASQKKQTK KVAKITPSKD  600
ASSKNLRKLT SIKLLSENDI R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	3e-58	FAR1 family protein