PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW13977.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 452aa MW: 50647.4 Da PI: 8.5429

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW13977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.7	1.3e-27	85	169	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+l+L+e+r+++++++r++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++ +qle RWW13977.1 85 RWPRQETLTLLEVRSRLDSSFREAARKGPLWDEVSRIMaEEHGYQRSGKKCREKLENLYKYYKKTKEGKAGR--QDGKNYRFCRQLE 169 8***********************************999*************************97..56678*99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MDLHELHYLI AERKPRFTSV SSDQHANQAL FMGQHYNFIP VAGPEQYGML MAGTGSEVGL 60 PPPPPPATEC FKFVGGGGGG GGQGRWPRQE TLTLLEVRSR LDSSFREAAR KGPLWDEVSR 120 IMAEEHGYQR SGKKCREKLE NLYKYYKKTK EGKAGRQDGK NYRFCRQLEA LYGESSNIAA 180 TEINQRSPSH ATNAATTLPA ADQGALQAPK LSGNISLSSS GECNEASSTE EEGDGSTRRL 240 IKTGGESWKS KVEEFIGAQI KRLMEAQATW LNQMLKTLEH MEQARVSREE DWRRQEAARL 300 DREHSLRAGE RAWSEARDAA IVQALEKMSR RELKPRPREE TNGNISTDDN SMAQRWPSRE 360 GRRGEGGLRE EVRAVVACVG CSRSSTKRCK EKWDDNSRSI NECSRKGMVT NKRPRKSGAM 420 DEDFEGWGSG WHEDGRQGSD VAGLQLTDAR WY

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MDLHELHYLI AERKPRFTSV SSDQHANQAL FMGQHYNFIP VAGPEQYGML MAGTGSEVGL  60
PPPPPPATEC FKFVGGGGGG GGQGRWPRQE TLTLLEVRSR LDSSFREAAR KGPLWDEVSR  120
IMAEEHGYQR SGKKCREKLE NLYKYYKKTK EGKAGRQDGK NYRFCRQLEA LYGESSNIAA  180
TEINQRSPSH ATNAATTLPA ADQGALQAPK LSGNISLSSS GECNEASSTE EEGDGSTRRL  240
IKTGGESWKS KVEEFIGAQI KRLMEAQATW LNQMLKTLEH MEQARVSREE DWRRQEAARL  300
DREHSLRAGE RAWSEARDAA IVQALEKMSR RELKPRPREE TNGNISTDDN SMAQRWPSRE  360
GRRGEGGLRE EVRAVVACVG CSRSSTKRCK EKWDDNSRSI NECSRKGMVT NKRPRKSGAM  420
DEDFEGWGSG WHEDGRQGSD VAGLQLTDAR WY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	7e-71	Trihelix family protein