PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13511.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 218aa MW: 24255.9 Da PI: 11.505 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 28.1 | 2.8e-09 | 63 | 82 | 1 | 20 |
GATA 1 CsnCgttkTplWRrgpdgnk 20 C+ C+t++TplWR+gp+g+k RWW13511.1 63 CADCRTSETPLWRSGPEGPK 82 ******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MMSTAIRTAA HRNWGSRHSR RAAMDGCDRR ETVKRYSRKR AKAAAAAVVK AADAVVHTPP 60 RVCADCRTSE TPLWRSGPEG PKVAFHSSVN PSVPLFPTLF PFHLRFLRFE SFSLCNACGI 120 KYRKRRKGLA PPTPTSSSAS NSQVGNVPAP AMKVLSTEEL KRRQREKQER TLKLLLLQHQ 180 RQRRSQSEEK AAVEAGKEVE EAARLLLSLS SAGLFVHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18380.1 | 4e-09 | GATA family protein |