PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 272aa MW: 30503 Da PI: 4.6174 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.1 | 6.3e-11 | 47 | 100 | 5 | 47 |
-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqky 47 ++ E++ ++++ +lG++ +Ia++++ gRt++++k++w+++ RWW13359.1 47 SEAEEKMVIELHSKLGNRcpsslfscfffpLCQAIASHLP-GRTDNEIKNHWNTH 100 899***************************99********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MSAAELGGGG GVLRDRVVET GLLRCGKSCR LRWTNYLRPD LKRGLLSEAE EKMVIELHSK 60 LGNRCPSSLF SCFFFPLCQA IASHLPGRTD NEIKNHWNTH IKKKLRRMGI DPLTHEPLIP 120 WANNDLLHQE QQQVGASADR REGNENVPEA QGEEENNTST VDDAFCTDEV PMIQPHEMIV 180 PCASTPSASY SISSSSSSSS SSSCSSSFSS VKTQEIQLPC MEWPESVCLW GLDDLNEWDF 240 NYGQGDEQVG LDPFTQWQRT ALDQETWKFE LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16600.1 | 1e-53 | MYB family protein |