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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 24603.9 Da PI: 8.8587 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.3e-20 | 64 | 113 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r++lg+f+tae Aa+a++aa+ +l+g RWW13151.1 64 RFRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDTAEAAARAYDAAAIALRG 113 69*******.**********883....5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MRCTSFEIKG SLCLAINNGR SSGVDFCVGK EKRLRERGFG SNPLLVAMRK GRPSAAEVAD 60 GPVRFRGVRK RPWGRFAAEI RDPWKKARVW LGTFDTAEAA ARAYDAAAIA LRGPDARTNF 120 PSHHCLPLPQ RPASSSLSST LESFSGPRVP AAPIHPRPSR ARGQVDPPPP HDLAAEEGCH 180 SDCGSSSSVI DDGDILSSKY WQPMLFDLNL LPPQDDDFQD MVLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 8e-23 | ERF family protein |