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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 270aa MW: 30097.1 Da PI: 9.9637 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 5.9e-17 | 43 | 86 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWW13069.1 43 RGNITPEEQLLILQLHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 86 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MMATNLTLSL SLSLAANYCS GLRRTGKSCR LRWLNYLRPD VRRGNITPEE QLLILQLHSR 60 WGNRWSKIAQ YLPGRTDNEI KNYWRTRVQK HAKQLRCDVN SKQFKDAMTY VWMPRLVERI 120 RAASGVSTTA PVCPAAEVEL VMKPSPEESS TPSSSFGAEF PPPPPAFDTF AAAAATQSGE 180 GELPGWWSES GDTDLGLPDF DHSVWGDDLW IPPSVVGLSK SGGEEGPPTR TNRLAAVSDV 240 RQRRGARPRR SNYGLYAHMV VNRGVLFPRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 5e-61 | MYB family protein |