PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11094.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 468aa MW: 52887.7 Da PI: 10.5694

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	79.6	4.4e-25	212	293	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W +qe+++Li++r ++e++ ++++k+ We v+++mrerg++r+p qCk+kw+nl +ryk ++ + + + ++cp+fd+l+ RWW11094.1 212 QWGQQETRDLIAIRADLERDPAVTRRNKTMWEGVAARMRERGYRRTPDQCKCKWKNLVNRYKGKETADPE----TGRQCPFFDELN 293 7***********************************************************99988887....4678****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MTTGGVSGTE SSTAPPSRAA LRHPPFLPFV VVGRTRRVSH ATPSQCPSRS QPALGTTDTQ 60 GFVGCLRHHQ PASLRQQHQP RVLRLDTVLP FLGGVVLKSF RTSSLPPLSL GETQAASSEA 120 GGEKKKKRIR VRVFWKEKRR MMHGGGGGGG GGDGESVGGR MAMLAGIPLQ MSPGPVGEMV 180 GTSGGGGGGG ALLPQQQQQQ QPQRGREERM PQWGQQETRD LIAIRADLER DPAVTRRNKT 240 MWEGVAARMR ERGYRRTPDQ CKCKWKNLVN RYKGKETADP ETGRQCPFFD ELNAVFVERA 300 KNMQRLLLES ESGASQSKKK PKRLGRDRSS DEFSDDDEEE DNDSEEELLP RGRRKKADQR 360 GGHQQHRGKA AAAAAAAGGI QELLQEFLRQ QQQMEMQWFE MMERRTRERR MFEQEWRQSM 420 EKLERERLML EQAWREREEQ RRMREESRAE KRDALLTTLL NKLIEDDL

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MTTGGVSGTE SSTAPPSRAA LRHPPFLPFV VVGRTRRVSH ATPSQCPSRS QPALGTTDTQ  60
GFVGCLRHHQ PASLRQQHQP RVLRLDTVLP FLGGVVLKSF RTSSLPPLSL GETQAASSEA  120
GGEKKKKRIR VRVFWKEKRR MMHGGGGGGG GGDGESVGGR MAMLAGIPLQ MSPGPVGEMV  180
GTSGGGGGGG ALLPQQQQQQ QPQRGREERM PQWGQQETRD LIAIRADLER DPAVTRRNKT  240
MWEGVAARMR ERGYRRTPDQ CKCKWKNLVN RYKGKETADP ETGRQCPFFD ELNAVFVERA  300
KNMQRLLLES ESGASQSKKK PKRLGRDRSS DEFSDDDEEE DNDSEEELLP RGRRKKADQR  360
GGHQQHRGKA AAAAAAAGGI QELLQEFLRQ QQQMEMQWFE MMERRTRERR MFEQEWRQSM  420
EKLERERLML EQAWREREEQ RRMREESRAE KRDALLTTLL NKLIEDDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	140	KKKKRIRVRVFWKEKRR
2	125	141	KKKKRIRVRVFWKEKRR
3	126	142	KKKKRIRVRVFWKEKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	4e-28	Trihelix family protein