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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW10911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 266aa MW: 27919.8 Da PI: 5.3099 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 3e-19 | 27 | 77 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r r +lg+f taeeAa a+++ + kl+ge RWW10911.1 27 LYRGVRQRH-WGKWVAEIRLPRN---RSRLWLGTFNTAEEAALAYDREAFKLRGE 77 59******9.**********955...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MAMSRPLYPS TLCPRPLLAP IPTPAKLYRG VRQRHWGKWV AEIRLPRNRS RLWLGTFNTA 60 EEAALAYDRE AFKLRGENAK LNFPHLFLGT GGGSGDRGGG GASCSSSSSS PPATPDEARP 120 QTINHQLQPQ PTPPVAFETA GVTPTVIGSS SSGDGSASGL DESGGPEPTA PETTPATPQP 180 HEMVWGNTAA ATEAWFSTWG PGSSIWDDID EANSLLLRSR FTSFADMDPS NAAPPSSSAT 240 TTASQDAAAS STAPAPGSSS LFLWKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G36060.1 | 5e-36 | ERF family protein |