PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10474.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 451aa MW: 46314.4 Da PI: 9.0606

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.5	2.3e-38	50	182	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 a++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ RWW10474.1 50 AAAKRSSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSSLSAPpskstplsfha 148 6789*****************************************************************999877777777774444444455566666 PP TCP 89 .................................k 89 RWW10474.1 149 lalahhrpdfeqvtdpgishaaamlgfhqlhphP 182 6666555555555555555544444444444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MGSIVRHGVV DASLAISSAK PDPSLSPGAV GPSSSSAAAD TSKKLAGAGA AAKRSSKDRH 60 TKVDGRGRRI RMPAICAARV FQLTRELGHK TDGETIEWLL QQAEPAIIAA TGTGTIPANF 120 STLNISLRSS GSSLSAPPSK STPLSFHALA LAHHRPDFEQ VTDPGISHAA AMLGFHQLHP 180 HPHQHQLLSA DQTGEGLQGG GSSGGGYSAD TYLRKRFRED LFKDEQHTPQ QQQQEGSGGP 240 GPSSPSSASK SMRAGSGLQL HQRSQQQEAA AAAAAGLTRP QGILPAAAMW AVAPNSGAGG 300 AFWMLPVSTG SAAPAVAAAT GPSEPSIWTF PAMAGQYRAG ISGGSSIQAP LQFMSRINLS 360 GGAEFQGGRA LPLGSMVLQQ PTGGMAAQHL GLGSSETNLG MLAALNAYNI GGGLSMNSEH 420 HQPVDHHHQA HSSHQQHQGA ASGEDHQTSS Q

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MGSIVRHGVV DASLAISSAK PDPSLSPGAV GPSSSSAAAD TSKKLAGAGA AAKRSSKDRH  60
TKVDGRGRRI RMPAICAARV FQLTRELGHK TDGETIEWLL QQAEPAIIAA TGTGTIPANF  120
STLNISLRSS GSSLSAPPSK STPLSFHALA LAHHRPDFEQ VTDPGISHAA AMLGFHQLHP  180
HPHQHQLLSA DQTGEGLQGG GSSGGGYSAD TYLRKRFRED LFKDEQHTPQ QQQQEGSGGP  240
GPSSPSSASK SMRAGSGLQL HQRSQQQEAA AAAAAGLTRP QGILPAAAMW AVAPNSGAGG  300
AFWMLPVSTG SAAPAVAAAT GPSEPSIWTF PAMAGQYRAG ISGGSSIQAP LQFMSRINLS  360
GGAEFQGGRA LPLGSMVLQQ PTGGMAAQHL GLGSSETNLG MLAALNAYNI GGGLSMNSEH  420
HQPVDHHHQA HSSHQQHQGA ASGEDHQTSS Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	2e-43	TCP family protein