PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09543.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 415aa MW: 45639.6 Da PI: 10.3903

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.1	3.1e-15	123	212	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + Li+a e+ +l+rg+lk+++W+ev++++ ++ g+++ pk qCk++++ l+k+yk +k + +++ ++p+f++l+ RWW09543.1 123 CWSEGATSILIDAWGERFLELSRGNLKQKHWQEVADAVtSRDGYTKAPKtdvQCKNRIDTLKKKYKIEKSKISATGGGATCSWPFFHRLD 212 7***********************************878899876643339**********999999888899999****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MSFERRDRVV SNLEVTLRAE MVALGWLRCS DLAVLIYADA VNSPHANARS LLPIRLPFLV 60 ATPCLRCVPL PWPLAPSPPQ RPSREAVTVA APPNHALPLA LPIQQPRASP AAGGGGGGGR 120 EDCWSEGATS ILIDAWGERF LELSRGNLKQ KHWQEVADAV TSRDGYTKAP KTDVQCKNRI 180 DTLKKKYKIE KSKISATGGG ATCSWPFFHR LDLLLGPNHK PAPPPPGSDI PAGIPIRPPA 240 HLPQLIPQRP RTSQPARKKA RSSPPSVSSK SADSSGDSSD GFPPPPPRVA NGKRQRREPA 300 EEEEGGGGRT AGLRELTQAI LRFGEVYERV ESSKLRQALE IEKQRMEFTR ELELQRMEFL 360 MKTQMELSQL NSNHHHHHGS NSRKKKRMDD AGGSSSNHHR HHNNSSNSNH SENNG

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MSFERRDRVV SNLEVTLRAE MVALGWLRCS DLAVLIYADA VNSPHANARS LLPIRLPFLV  60
ATPCLRCVPL PWPLAPSPPQ RPSREAVTVA APPNHALPLA LPIQQPRASP AAGGGGGGGR  120
EDCWSEGATS ILIDAWGERF LELSRGNLKQ KHWQEVADAV TSRDGYTKAP KTDVQCKNRI  180
DTLKKKYKIE KSKISATGGG ATCSWPFFHR LDLLLGPNHK PAPPPPGSDI PAGIPIRPPA  240
HLPQLIPQRP RTSQPARKKA RSSPPSVSSK SADSSGDSSD GFPPPPPRVA NGKRQRREPA  300
EEEEGGGGRT AGLRELTQAI LRFGEVYERV ESSKLRQALE IEKQRMEFTR ELELQRMEFL  360
MKTQMELSQL NSNHHHHHGS NSRKKKRMDD AGGSSSNHHR HHNNSSNSNH SENNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	4e-35	Trihelix family protein