PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW09540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23008.6 Da PI: 7.1124 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.5e-11 | 71 | 108 | 15 | 55 |
AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 Wv+eIr p++ r r+++g+++++e+Aa+a +aa+ +l+g RWW09540.1 71 WVSEIRLPNS---RDRIWVGSYDSPEKAARAFDAAAVCLRG 108 *******933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MEKAHAHIVS QLTTPVVLTP PRTLAFDSPA TRFAAPMVYD PMTSPSRQRH SSSTSGRTRC 60 RGCGSGSGAG WVSEIRLPNS RDRIWVGSYD SPEKAARAFD AAAVCLRGPR ARLNFPDSPP 120 PCVTRPLSPQ HIQAAAARHA ATPPSQPRGA PTAGEAGSAE ALYWSFMDPQ QAAASEERTE 180 FPAAMDDYFS PAPPADVVED HGAVDFGSNS FLWSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 1e-26 | ERF family protein |