PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08973.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ZF-HD

Protein Properties

Length: 377aa MW: 40407.4 Da PI: 8.8792

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	103.5	1.4e-32	167	221	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +vrY+eClkNhA+ +GghavDGCgEfm++ geegt++al+CaACgCHRnFHR+e+e RWW08973.1 167 GVRYRECLKNHAVGIGGHAVDGCGEFMAA-GEEGTIDALRCAACGCHRNFHRKEPE 221 68************************9.999******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MHSHPCGGLL PADRPEVRRQ GMASVQPRMV CPSSHDMNPS FSHASPPFLI TPSFKSVDIP 60 HALDLTSNTS DLNSSPFLRF VHEEQKRVLV FCRDKPVEEA VSHRKRSIQW HSTAFHSEKL 120 PVGSSYDSPM ENSGRGGGAK MGGGESAATM AAGGSGQRKA YGCGGGGVRY RECLKNHAVG 180 IGGHAVDGCG EFMAAGEEGT IDALRCAACG CHRNFHRKEP EGGGAGAGGA TGGGGAMDVS 240 GYHPQFSPYY RTPAGYLHHH HYAAAAFASQ QHRPAPLALP STSGGHSRDE QEDVSNPMMG 300 GGGGGMVASG SGTRKRFRTK FTPEQKDKML AFAERLGWRI QKHDEAAVQQ FCEETCVKRH 360 VLKVWMHNNK HTLGKKP

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MHSHPCGGLL PADRPEVRRQ GMASVQPRMV CPSSHDMNPS FSHASPPFLI TPSFKSVDIP  60
HALDLTSNTS DLNSSPFLRF VHEEQKRVLV FCRDKPVEEA VSHRKRSIQW HSTAFHSEKL  120
PVGSSYDSPM ENSGRGGGAK MGGGESAATM AAGGSGQRKA YGCGGGGVRY RECLKNHAVG  180
IGGHAVDGCG EFMAAGEEGT IDALRCAACG CHRNFHRKEP EGGGAGAGGA TGGGGAMDVS  240
GYHPQFSPYY RTPAGYLHHH HYAAAAFASQ QHRPAPLALP STSGGHSRDE QEDVSNPMMG  300
GGGGGMVASG SGTRKRFRTK FTPEQKDKML AFAERLGWRI QKHDEAAVQQ FCEETCVKRH  360
VLKVWMHNNK HTLGKKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	7e-66	ZF-HD family protein