PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW08788.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 306aa    MW: 33658.5 Da    PI: 6.2493
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW08788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-10637132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     rg+WTteEd+ l ++v+q+G g+W++ ar+ g
       RWW08788.1  6 RGPWTTEEDLVLNKYVAQHGEGRWNALARCAG 37
                     89***************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEEVRRGPWT TEEDLVLNKY VAQHGEGRWN ALARCAGFDG STIFAQMSGA GTSRRRSSSS  60
SSTSTLVGEI AQYLPGRTDN EIKNYWRTRV QKHANLLRCD VNSTTFKDAI RYVWMPRLLE  120
RIRAASGGAA FSASCTSPVA AAAADPLPSH PLKQPEQATL GSETVESSPS EEASLPIPFS  180
CFADCHSTTM QGWGGWAADS LSLPACCDEQ GGWPAGDLLS GESLWSMEDD WGKKRKEIIE  240
RLWWRNVDRR QSTDAAAFLL DEFVSPTFPH TDVHFGSLRR PAACRGCRES TRSVTPDQPT  300
AYSISC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.12e-39MYB family protein