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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW08392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 20127.2 Da PI: 4.6858 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.8e-18 | 13 | 62 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r +r +lg+f ta +Aa+a+++a+++l+g RWW08392.1 13 TYRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFSTALKAAQAYDNAARSLYG 62 69****999.**********8...3.35***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MKGKGGPENQ ACTYRGVRQR TWGKWVAEIR EPNRGARLWL GTFSTALKAA QAYDNAARSL 60 YGDCARLNLS DSRPSSVRDL NSTGSMPPPP PPPAAALVKQ DFRCSSSLSA ETSTGESQAS 120 FPESIGSPAA HFYDGGFDSF DDYISGLPKP EDFGLEAFHS VPFLDEQEFD TQFMNFEPLQ 180 VSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 2e-36 | ERF family protein |