PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08323.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 407aa MW: 43035.2 Da PI: 7.4239

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.6e-05	117	136	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +Cp Cgk+F++ +L H+r RWW08323.1 117 TCPECGKTFPSEKSLFGHLR 136 6*****************98 PP
2	zf-C2H2	10.7	0.0017	268	290	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k+F ++ L H +H RWW08323.1 268 YQCSVCFKTFASHQALGGHTASH 290 9************9999998877 PP
3	zf-C2H2	12.3	0.00051	325	347	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ +Fs+ L H+r+H RWW08323.1 325 HRCTNCSLTFSSGQALGGHMRRH 347 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MEVRLMEGGS HYGTEGSAVG VEDPHDEKLP SKGPRFGDGK AGVDQEVVSP DSGDTETASG 60 TGAARGHQSV SSGGDGEELP SDEDSDDESH LGDDETFDEG SGSSNRKHPN KGPKVPTCPE 120 CGKTFPSEKS LFGHLRCHPE RDYRGAIPPP GARRKSQSNA CSSVARGPPA TKWSTPKRGG 180 KGAAVDEDSD VVVAKALLLL ADGKPWGQET PAVEKERSKT KQVVTTRFCG THVLADRSYG 240 NEVISSYNSG SKKRKIDSGK TPTRCRRYQC SVCFKTFASH QALGGHTASH NKNKSNAQEV 300 PIAAGNGCVH IAAANAVSKA ATAEHRCTNC SLTFSSGQAL GGHMRRHFNE LQNQALSSSA 360 HSSESDKGAH RGMLQNGAPS SPAHSSQRDK GAVRGMFDFD LNEMPDL

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MEVRLMEGGS HYGTEGSAVG VEDPHDEKLP SKGPRFGDGK AGVDQEVVSP DSGDTETASG  60
TGAARGHQSV SSGGDGEELP SDEDSDDESH LGDDETFDEG SGSSNRKHPN KGPKVPTCPE  120
CGKTFPSEKS LFGHLRCHPE RDYRGAIPPP GARRKSQSNA CSSVARGPPA TKWSTPKRGG  180
KGAAVDEDSD VVVAKALLLL ADGKPWGQET PAVEKERSKT KQVVTTRFCG THVLADRSYG  240
NEVISSYNSG SKKRKIDSGK TPTRCRRYQC SVCFKTFASH QALGGHTASH NKNKSNAQEV  300
PIAAGNGCVH IAAANAVSKA ATAEHRCTNC SLTFSSGQAL GGHMRRHFNE LQNQALSSSA  360
HSSESDKGAH RGMLQNGAPS SPAHSSQRDK GAVRGMFDFD LNEMPDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17180.1	4e-14	C2H2 family protein