PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW07968.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 678aa MW: 74511.5 Da PI: 7.1327

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW07968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.5	6.1e-24	130	231	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t++++d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + +++ l RWW07968.1 130 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TVIVKDVQGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAENGDL 224 89**************************986545444..8********************************************..4488889 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ RWW07968.1 225 RIGIRRA 231 **996 PP
2	Auxin_resp	107.3	1.7e-35	299	382	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+ + +FevvY+Pra t+eF+vk++ v a+++++s+GmRfkmafetedss++++ +Gt+++v+ +dp+ WpnS+Wr+L+ RWW07968.1 299 AATLATRGHPFEVVYYPRANTPEFCVKAAAVTVAIRTRWSPGMRFKMAFETEDSSRISWfMGTISSVEVADPLIWPNSPWRLLQ 382 6789999***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
LELLFPTLAF GESVKPSMKE HDRCLDSQLW HACAGGMVQM PAMNSRVYYF PQGHAEHAQG 60 VVDFGISRQI PPLTLCRVTA IKFMADMETD EVFAKIQMVP ISNSELDCGE DGGLDLGMNG 120 IDLQEKPTSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YSAEPPVQTV IVKDVQGEVW 180 KFRHIYRGTP RRHLLTTGWS TFVNQKKLVA GDSIVFLRAE NGDLRIGIRR AKRGGVGDGP 240 ERPSGWNPPG GSGVSGYGGF SVFRSEEESN LIRGSGDNFT SSRGMRGRGR VTADSVVEAA 300 TLATRGHPFE VVYYPRANTP EFCVKAAAVT VAIRTRWSPG MRFKMAFETE DSSRISWFMG 360 TISSVEVADP LIWPNSPWRL LQVTWDEPDL LHNVKHVSPW LVKLVSHMPA LNLAHFSPPS 420 KKPRIPQHPD FPFESHFPTP MVPETPLGPS DSIFCCISDS APAGIQGARH ANFGLSLSDL 480 HLNKLQMGLF HAGFHRLDHA NPPSRISTGV IVSNSTFHDN NVSCLLTIGH PSQSLNKSCN 540 RKPPQLVLFG QPILTEQQVS LNKHENIIFT GATGKNSPDR NVENMNVSGG SGSAIGQKGP 600 CYRNCRNSDP SLETGHCKVF MQSDDVGRTL DLSVFGSYEE LYGKLADMFG IEKSEIMSHV 660 LYKDAAGAIK HTGDEPFW

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

LELLFPTLAF GESVKPSMKE HDRCLDSQLW HACAGGMVQM PAMNSRVYYF PQGHAEHAQG  60
VVDFGISRQI PPLTLCRVTA IKFMADMETD EVFAKIQMVP ISNSELDCGE DGGLDLGMNG  120
IDLQEKPTSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YSAEPPVQTV IVKDVQGEVW  180
KFRHIYRGTP RRHLLTTGWS TFVNQKKLVA GDSIVFLRAE NGDLRIGIRR AKRGGVGDGP  240
ERPSGWNPPG GSGVSGYGGF SVFRSEEESN LIRGSGDNFT SSRGMRGRGR VTADSVVEAA  300
TLATRGHPFE VVYYPRANTP EFCVKAAAVT VAIRTRWSPG MRFKMAFETE DSSRISWFMG  360
TISSVEVADP LIWPNSPWRL LQVTWDEPDL LHNVKHVSPW LVKLVSHMPA LNLAHFSPPS  420
KKPRIPQHPD FPFESHFPTP MVPETPLGPS DSIFCCISDS APAGIQGARH ANFGLSLSDL  480
HLNKLQMGLF HAGFHRLDHA NPPSRISTGV IVSNSTFHDN NVSCLLTIGH PSQSLNKSCN  540
RKPPQLVLFG QPILTEQQVS LNKHENIIFT GATGKNSPDR NVENMNVSGG SGSAIGQKGP  600
CYRNCRNSDP SLETGHCKVF MQSDDVGRTL DLSVFGSYEE LYGKLADMFG IEKSEIMSHV  660
LYKDAAGAIK HTGDEPFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein