PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW06184.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 253aa MW: 27679.7 Da PI: 4.4989 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.1 | 2.3e-14 | 37 | 108 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........................tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde lv +++++G g W++Ia+ ++ gRt++++k+ w+++l RWW06184.1 37 KGPWSPEEDETLVGYIQRYGHGnwralpkqageylrlivvvlevfeiLWSAIAASLP-GRTDNEIKNVWHSHL 108 79*******************************************************.***********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
RTAARSPAKP FDRGRKEEEE CFGDMVRAPC CGIGVKKGPW SPEEDETLVG YIQRYGHGNW 60 RALPKQAGEY LRLIVVVLEV FEILWSAIAA SLPGRTDNEI KNVWHSHLKK LVSPNTSSRE 120 SKKKTNGGGS RSKKASEPIT TQPDTDSENA LFVSAASQAQ SNSDFSSCAT DSPTVSRGIS 180 DDARGSFSSD AFPEIDESFW LDALSMDESA ASVDLPPVGD EHSDLLVSFD SDDMVFWLTF 240 LEGVGDLQEL SRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 9e-38 | MYB family protein |