PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW06184.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 253aa    MW: 27679.7 Da    PI: 4.4989
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW06184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.12.3e-1437108148
                      TSSS-HHHHHHHHHHHHHTTTT.........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.........................tWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+W++eEde lv +++++G g                          W++Ia+ ++ gRt++++k+ w+++l
       RWW06184.1  37 KGPWSPEEDETLVGYIQRYGHGnwralpkqageylrlivvvlevfeiLWSAIAASLP-GRTDNEIKNVWHSHL 108
                      79*******************************************************.***********9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
RTAARSPAKP FDRGRKEEEE CFGDMVRAPC CGIGVKKGPW SPEEDETLVG YIQRYGHGNW  60
RALPKQAGEY LRLIVVVLEV FEILWSAIAA SLPGRTDNEI KNVWHSHLKK LVSPNTSSRE  120
SKKKTNGGGS RSKKASEPIT TQPDTDSENA LFVSAASQAQ SNSDFSSCAT DSPTVSRGIS  180
DDARGSFSSD AFPEIDESFW LDALSMDESA ASVDLPPVGD EHSDLLVSFD SDDMVFWLTF  240
LEGVGDLQEL SRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.19e-38MYB family protein