PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW06102.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 269aa MW: 29839.8 Da PI: 7.7211

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW06102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l++ ++ +G g+Wkt++ g++R+ k+c++rw +yl RWW06102.1 14 KGSWTSEEDQKLIQFIQNHGRGSWKTVPTLAGLNRCCKSCRLRWTNYL 61 799*******************************************97 PP
2	Myb_DNA-binding	48.9	1.5e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+ +++++ +G++ W+tIa++++ gRt++++k++ ++++ RWW06102.1 67 RGKLSPEEENTILHLHSIHGNR-WSTIAAHLP-GRTDNDVKNFCNSLK 112 7999****************.*****.********99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGRSPCCDGN DLKKGSWTSE EDQKLIQFIQ NHGRGSWKTV PTLAGLNRCC KSCRLRWTNY 60 LRPDIKRGKL SPEEENTILH LHSIHGNRWS TIAAHLPGRT DNDVKNFCNS LKKKKKPICT 120 NTDPMTYRTS TELFASLLPH VALASRKEIM ERSSWDDYGG HLQAEAVVTS GSSNMNCPSS 180 IITSEMEPME LANTPIPWAT SLPSPCPSPL FGSPALHRNL PGTSCSFEHP LIDDMMKSMV 240 SSPTLPPLHD ASWGNEADLS TSRYGDPSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	117	LKKKKKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	2e-67	MYB family protein