PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW05799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 129aa MW: 14589.1 Da PI: 10.5798 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.9 | 5.5e-14 | 18 | 61 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 T+eEd ll+ +++ +G g+W++ ++ g+ R++k+c++rw +yl RWW05799.1 18 TKEEDHLLIAYIRAHGEGSWRSLPKAAGLLRCGKSCRLRWINYL 61 99**************************99************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MARSPCCEKA PIKRGARTKE EDHLLIAYIR AHGEGSWRSL PKAAGLLRCG KSCRLRWINY 60 LRPGLRRGNF TMEEDELIIK LHGRLGNRQV VAASVIIIIR SEQMFMTTDS IELWQMVGHS 120 CKVAGKNGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 7e-48 | MYB family protein |